Selfhosted
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Sorry if I’m about 10 years behind Linux development, but how does Docker compare with the latest FlatPak trend in application distribution? How you have described it sounds somewhat similar, outside of also getting segmented access to data and networks.
Docker is to servers, as flatpak is to desktop apps.
I would probably run away if i saw flatpak on a headless server
Flatpak has better security features than docker. While its true it's not designed with server apps in mind, it is possible to use its underlying "bubblewrap" to create isolated environments. Maybe in the future, tooling will improve its features and bridge the gap.
For desktop apps Flatpak is almost certainly a better option than Docker. Flatpak uses the same core concepts as Docker but Flatpak is more suited for distributing graphical apps.
Generally I would still default to my distro's packages where possible, but if they are unsuitable for whatever reason (not available, too old, ...) then a Flatpak is a great option.